# Use an official base image
FROM ubuntu:20.04

# Set the maintainer label (optional)
LABEL maintainer="youremail@example.com"

# Install dependencies (e.g., tools like FastQC, Fastp, etc.)
RUN apt-get update && \
    apt-get install -y \
    fastqc \
    fastp \
    bwa \
    samtools \
    bcftools

# Set up any additional configurations if needed
# For example, setting environmental variables:
ENV PATH="/usr/local/bin:${PATH}"

# Expose ports if necessary (for web services, etc.)
EXPOSE 8080

# Command to run when the container starts
CMD ["bash"]