FastQCFastQC Report
Thu 9 Jan 2025
SRR21995810_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR21995810_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4532533
Total Bases684.4 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTATACCATATCTCGTAT47200.10413603166264868TruSeq Adapter, Index 9 (97% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)