# This file was produced by bcftools stats (1.21+htslib-1.21) and can be plotted using plot-vcfstats.
# The command line was:	bcftools stats  SRR21995814.filtered_variants.vcf
#
# Definition of sets:
# ID	[2]id	[3]tab-separated file names
ID	0	SRR21995814.filtered_variants.vcf
# SN, Summary numbers:
#   number of records   .. number of data rows in the VCF
#   number of no-ALTs   .. reference-only sites, ALT is either "." or identical to REF
#   number of SNPs      .. number of rows with a SNP
#   number of MNPs      .. number of rows with a MNP, such as CC>TT
#   number of indels    .. number of rows with an indel
#   number of others    .. number of rows with other type, for example a symbolic allele or
#                          a complex substitution, such as ACT>TCGA
#   number of multiallelic sites     .. number of rows with multiple alternate alleles
#   number of multiallelic SNP sites .. number of rows with multiple alternate alleles, all SNPs
# 
#   Note that rows containing multiple types will be counted multiple times, in each
#   counter. For example, a row with a SNP and an indel increments both the SNP and
#   the indel counter.
# 
# SN	[2]id	[3]key	[4]value
SN	0	number of samples:	1
SN	0	number of records:	42638
SN	0	number of no-ALTs:	0
SN	0	number of SNPs:	42396
SN	0	number of MNPs:	0
SN	0	number of indels:	242
SN	0	number of others:	0
SN	0	number of multiallelic sites:	52
SN	0	number of multiallelic SNP sites:	49
# TSTV, transitions/transversions
#   - transitions, see https://en.wikipedia.org/wiki/Transition_(genetics)
#   - transversions, see https://en.wikipedia.org/wiki/Transversion
# TSTV	[2]id	[3]ts	[4]tv	[5]ts/tv	[6]ts (1st ALT)	[7]tv (1st ALT)	[8]ts/tv (1st ALT)
TSTV	0	31155	11290	2.76	31144	11252	2.77
# SiS, Singleton stats:
#   - allele count, i.e. the number of singleton genotypes (AC=1)
#   - number of transitions, see above
#   - number of transversions, see above
#   - repeat-consistent, inconsistent and n/a: experimental and useless stats [DEPRECATED]
# SiS	[2]id	[3]allele count	[4]number of SNPs	[5]number of transitions	[6]number of transversions	[7]number of indels	[8]repeat-consistent	[9]repeat-inconsistent	[10]not applicable
SiS	0	1	1784	1102	682	55	0	0	55
# AF, Stats by non-reference allele frequency:
# AF	[2]id	[3]allele frequency	[4]number of SNPs	[5]number of transitions	[6]number of transversions	[7]number of indels	[8]repeat-consistent	[9]repeat-inconsistent	[10]not applicable
AF	0	0.000000	1784	1102	682	55	0	0	55
AF	0	0.990000	40661	30053	10608	190	0	0	190
# QUAL, Stats by quality
# QUAL	[2]id	[3]Quality	[4]number of SNPs	[5]number of transitions (1st ALT)	[6]number of transversions (1st ALT)	[7]number of indels
QUAL	0	30.0	5	3	2	1
QUAL	0	30.1	4	4	0	1
QUAL	0	30.2	2	1	1	0
QUAL	0	30.3	5	3	2	0
QUAL	0	30.4	7	5	2	1
QUAL	0	30.5	4	2	2	0
QUAL	0	30.6	4	4	0	0
QUAL	0	30.7	1	1	0	0
QUAL	0	30.9	1	1	0	0
QUAL	0	31.0	2	2	0	0
QUAL	0	31.3	1	0	1	0
QUAL	0	31.4	1	1	0	0
QUAL	0	31.6	2	1	1	0
QUAL	0	31.8	1	1	0	1
QUAL	0	31.9	2	0	2	0
QUAL	0	32.1	2	1	1	0
QUAL	0	32.3	2	1	1	0
QUAL	0	32.4	3	0	3	0
QUAL	0	32.6	1	1	0	0
QUAL	0	32.7	0	0	0	1
QUAL	0	32.8	1	1	0	3
QUAL	0	32.9	2	1	1	0
QUAL	0	33.1	2	1	1	0
QUAL	0	33.2	1	0	1	0
QUAL	0	33.3	3	2	1	0
QUAL	0	33.4	2	2	0	0
QUAL	0	33.5	1	1	0	0
QUAL	0	33.6	6	3	3	0
QUAL	0	33.7	1	0	1	0
QUAL	0	33.8	3	3	0	0
QUAL	0	33.9	6	4	2	0
QUAL	0	34.0	0	0	0	1
QUAL	0	34.3	1	1	0	0
QUAL	0	34.4	4	3	1	0
QUAL	0	34.5	0	0	0	1
QUAL	0	34.7	0	0	0	2
QUAL	0	34.8	1	1	0	0
QUAL	0	34.9	1	1	0	0
QUAL	0	35.0	0	0	0	1
QUAL	0	35.1	1	0	1	0
QUAL	0	35.2	5	4	1	0
QUAL	0	35.3	1	1	0	0
QUAL	0	35.4	6	4	2	0
QUAL	0	35.5	3	3	0	0
QUAL	0	35.6	1	1	0	0
QUAL	0	35.8	1	1	0	0
QUAL	0	36.0	3	2	1	0
QUAL	0	36.1	1	0	1	0
QUAL	0	36.2	4	1	3	0
QUAL	0	36.3	1	1	0	0
QUAL	0	36.4	3	2	1	0
QUAL	0	36.5	3	3	0	0
QUAL	0	36.6	2	2	0	0
QUAL	0	36.7	4	4	0	0
QUAL	0	36.8	3	3	0	0
QUAL	0	36.9	4	1	3	0
QUAL	0	37.0	3	2	1	0
QUAL	0	37.1	2	1	1	0
QUAL	0	37.2	1	1	0	0
QUAL	0	37.3	3	1	2	0
QUAL	0	37.4	5	2	3	1
QUAL	0	37.5	1	0	1	0
QUAL	0	37.6	1	1	0	0
QUAL	0	37.7	2	1	1	0
QUAL	0	37.8	1	1	0	0
QUAL	0	37.9	1	0	1	0
QUAL	0	38.1	4	3	1	0
QUAL	0	38.2	1	0	1	0
QUAL	0	38.3	1	0	1	0
QUAL	0	38.5	2	1	1	0
QUAL	0	38.7	1	0	1	0
QUAL	0	38.8	1	0	1	0
QUAL	0	38.9	1	1	0	0
QUAL	0	39.0	2	1	1	0
QUAL	0	39.1	2	2	0	0
QUAL	0	39.2	2	2	0	0
QUAL	0	39.3	3	0	3	0
QUAL	0	39.4	3	1	2	0
QUAL	0	39.5	2	0	2	0
QUAL	0	39.6	1	1	0	0
QUAL	0	39.7	2	2	0	0
QUAL	0	39.8	2	2	0	1
QUAL	0	39.9	5	2	3	1
QUAL	0	40.0	4	2	2	0
QUAL	0	40.1	1	0	1	0
QUAL	0	40.2	2	1	1	0
QUAL	0	40.3	2	1	1	1
QUAL	0	40.4	1	1	0	0
QUAL	0	40.5	3	2	1	0
QUAL	0	40.6	1	1	0	0
QUAL	0	40.7	3	2	1	0
QUAL	0	40.8	2	1	1	0
QUAL	0	40.9	4	2	2	0
QUAL	0	41.1	1	0	1	0
QUAL	0	41.2	1	1	0	0
QUAL	0	41.3	1	0	1	0
QUAL	0	41.4	9	4	5	0
QUAL	0	41.6	1	0	1	0
QUAL	0	41.8	1	1	0	0
QUAL	0	41.9	3	2	1	0
QUAL	0	42.0	2	2	0	0
QUAL	0	42.5	1	1	0	0
QUAL	0	42.6	2	1	1	0
QUAL	0	42.7	3	2	1	0
QUAL	0	42.8	3	2	1	0
QUAL	0	42.9	1	1	0	0
QUAL	0	43.0	4	3	1	1
QUAL	0	43.1	1	1	0	0
QUAL	0	43.2	3	2	1	0
QUAL	0	43.3	3	1	2	0
QUAL	0	43.4	1	1	0	0
QUAL	0	43.5	2	2	0	0
QUAL	0	43.6	2	0	2	0
QUAL	0	43.7	1	0	1	0
QUAL	0	43.8	2	1	1	0
QUAL	0	43.9	5	3	2	0
QUAL	0	44.0	3	1	2	0
QUAL	0	44.1	3	1	2	0
QUAL	0	44.2	1	1	0	0
QUAL	0	44.4	2	2	0	1
QUAL	0	44.5	1	1	0	0
QUAL	0	44.6	4	4	0	0
QUAL	0	44.8	2	2	0	0
QUAL	0	44.9	2	2	0	0
QUAL	0	45.1	2	2	0	0
QUAL	0	45.2	1	0	1	0
QUAL	0	45.4	2	2	0	1
QUAL	0	45.5	3	2	1	0
QUAL	0	45.8	3	2	1	0
QUAL	0	46.0	3	3	0	0
QUAL	0	46.2	1	0	1	0
QUAL	0	46.3	1	1	0	0
QUAL	0	46.4	2	1	1	0
QUAL	0	46.5	2	2	0	0
QUAL	0	46.6	3	3	0	0
QUAL	0	46.7	5	4	1	0
QUAL	0	46.8	2	1	1	0
QUAL	0	46.9	4	2	2	1
QUAL	0	47.1	1	0	1	0
QUAL	0	47.2	3	1	2	1
QUAL	0	47.3	3	3	0	0
QUAL	0	47.5	1	1	0	0
QUAL	0	47.9	1	1	0	0
QUAL	0	48.1	1	0	1	0
QUAL	0	48.2	2	2	0	0
QUAL	0	48.3	2	1	1	0
QUAL	0	48.4	0	0	0	1
QUAL	0	48.6	1	0	1	0
QUAL	0	48.9	2	2	0	0
QUAL	0	49.0	3	2	1	0
QUAL	0	49.1	4	2	2	0
QUAL	0	49.3	5	4	1	0
QUAL	0	49.4	4	3	1	0
QUAL	0	49.5	2	2	0	0
QUAL	0	49.7	2	1	1	0
QUAL	0	49.8	2	2	0	0
QUAL	0	50.0	6	4	2	0
QUAL	0	50.1	1	1	0	0
QUAL	0	50.2	3	2	1	0
QUAL	0	50.3	4	3	1	0
QUAL	0	50.4	2	2	0	0
QUAL	0	50.5	2	2	0	0
QUAL	0	50.6	2	1	1	0
QUAL	0	50.8	1	0	1	0
QUAL	0	50.9	1	1	0	0
QUAL	0	51.0	1	0	1	0
QUAL	0	51.2	1	0	1	0
QUAL	0	51.3	1	1	0	0
QUAL	0	51.4	1	0	1	0
QUAL	0	51.5	1	1	0	0
QUAL	0	51.6	1	0	1	0
QUAL	0	51.8	1	0	1	0
QUAL	0	51.9	2	1	1	0
QUAL	0	52.2	3	2	1	0
QUAL	0	52.3	3	3	0	0
QUAL	0	52.4	2	1	1	0
QUAL	0	52.6	3	2	1	1
QUAL	0	52.7	0	0	0	1
QUAL	0	52.8	1	0	1	0
QUAL	0	52.9	2	1	1	0
QUAL	0	53.0	1	1	0	0
QUAL	0	53.1	2	1	1	0
QUAL	0	53.2	1	0	1	0
QUAL	0	53.4	5	2	3	0
QUAL	0	53.5	3	1	2	0
QUAL	0	53.6	3	1	2	0
QUAL	0	53.7	7	4	3	0
QUAL	0	53.8	1	0	1	0
QUAL	0	53.9	2	1	1	0
QUAL	0	54.3	1	1	0	0
QUAL	0	54.4	1	1	0	0
QUAL	0	54.6	1	1	0	0
QUAL	0	54.9	1	1	0	0
QUAL	0	55.0	0	0	0	1
QUAL	0	55.1	3	3	0	0
QUAL	0	55.2	1	0	1	0
QUAL	0	55.3	3	2	1	0
QUAL	0	55.4	1	1	0	0
QUAL	0	55.5	1	1	0	0
QUAL	0	55.6	1	1	0	0
QUAL	0	55.7	3	3	0	0
QUAL	0	55.8	5	4	1	0
QUAL	0	56.0	1	1	0	0
QUAL	0	56.1	4	3	1	0
QUAL	0	56.2	1	0	1	0
QUAL	0	56.4	3	1	2	0
QUAL	0	56.5	3	3	0	0
QUAL	0	56.6	3	1	2	0
QUAL	0	56.8	5	2	3	0
QUAL	0	56.9	2	1	1	0
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QUAL	0	57.2	1	0	1	0
QUAL	0	57.3	1	0	1	0
QUAL	0	57.5	1	1	0	0
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QUAL	0	58.1	4	3	1	0
QUAL	0	58.2	2	1	1	0
QUAL	0	58.4	1	1	0	0
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QUAL	0	58.8	2	2	0	0
QUAL	0	58.9	1	1	0	0
QUAL	0	59.0	3	2	1	0
QUAL	0	59.1	1	1	0	0
QUAL	0	59.2	3	3	0	0
QUAL	0	59.3	1	0	1	0
QUAL	0	59.4	2	2	0	0
QUAL	0	59.6	2	1	1	0
QUAL	0	59.7	1	0	1	0
QUAL	0	59.8	3	3	0	0
QUAL	0	60.0	1	0	1	1
QUAL	0	60.1	1	0	1	0
QUAL	0	60.2	1	1	0	1
QUAL	0	60.3	4	3	1	0
QUAL	0	60.4	1	1	0	0
QUAL	0	60.6	2	1	1	0
QUAL	0	60.7	1	1	0	0
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QUAL	0	61.0	2	1	1	0
QUAL	0	61.2	1	1	0	0
QUAL	0	61.4	2	1	1	0
QUAL	0	61.5	1	0	1	0
QUAL	0	61.6	1	1	0	0
QUAL	0	61.9	4	3	1	0
QUAL	0	62.1	2	1	1	0
QUAL	0	62.2	3	2	1	1
QUAL	0	62.3	1	0	1	0
QUAL	0	62.4	3	1	2	1
QUAL	0	62.5	2	2	0	0
QUAL	0	62.6	1	1	0	0
QUAL	0	62.7	2	0	2	0
QUAL	0	62.8	2	2	0	0
QUAL	0	62.9	1	1	0	0
QUAL	0	63.2	1	1	0	0
QUAL	0	63.3	1	1	0	0
QUAL	0	63.4	3	3	0	0
QUAL	0	63.5	2	1	1	0
QUAL	0	63.6	1	1	0	0
QUAL	0	63.7	2	1	1	0
QUAL	0	64.3	2	1	1	0
QUAL	0	64.7	1	0	1	0
QUAL	0	64.8	5	4	1	0
QUAL	0	65.2	2	1	1	0
QUAL	0	65.4	0	0	0	1
QUAL	0	65.5	1	1	0	0
QUAL	0	65.6	2	2	0	0
QUAL	0	65.7	1	0	1	0
QUAL	0	65.8	6	1	5	0
QUAL	0	65.9	6	2	4	0
QUAL	0	66.0	1	0	1	0
QUAL	0	66.3	1	1	0	0
QUAL	0	66.4	1	1	0	0
QUAL	0	66.5	4	3	1	0
QUAL	0	66.6	1	0	1	0
QUAL	0	66.8	3	1	2	0
QUAL	0	67.1	1	1	0	0
QUAL	0	67.2	1	1	0	1
QUAL	0	67.3	2	2	0	0
QUAL	0	67.4	2	2	0	0
QUAL	0	67.7	1	1	0	0
QUAL	0	67.9	2	2	0	0
QUAL	0	68.3	2	1	1	0
QUAL	0	68.4	1	0	1	0
QUAL	0	68.5	3	2	1	0
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QUAL	0	68.8	2	1	1	0
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QUAL	0	69.3	1	0	1	0
QUAL	0	69.4	0	0	0	1
QUAL	0	69.6	1	1	0	0
QUAL	0	69.7	1	1	0	0
QUAL	0	69.8	3	2	1	0
QUAL	0	70.3	0	0	0	2
QUAL	0	70.5	1	1	0	0
QUAL	0	70.7	1	1	0	0
QUAL	0	70.9	1	1	0	0
QUAL	0	71.2	1	0	1	0
QUAL	0	71.3	1	0	1	0
QUAL	0	71.4	1	0	1	0
QUAL	0	71.5	1	1	0	0
QUAL	0	72.2	2	2	0	0
QUAL	0	72.5	1	1	0	0
QUAL	0	72.6	2	2	0	0
QUAL	0	73.0	1	0	1	0
QUAL	0	73.3	1	1	0	0
QUAL	0	73.4	1	1	0	0
QUAL	0	73.5	1	0	1	0
QUAL	0	73.6	1	1	0	0
QUAL	0	73.8	2	1	1	0
QUAL	0	73.9	1	1	0	0
QUAL	0	74.2	1	0	1	0
QUAL	0	74.3	1	0	1	0
QUAL	0	74.4	4	3	1	0
QUAL	0	74.5	1	0	1	0
QUAL	0	74.7	1	1	0	0
QUAL	0	74.8	1	1	0	0
QUAL	0	75.4	2	2	0	0
QUAL	0	75.7	2	0	2	1
QUAL	0	75.8	1	1	0	0
QUAL	0	76.0	2	2	0	0
QUAL	0	76.1	1	1	0	0
QUAL	0	76.2	1	1	0	0
QUAL	0	76.3	3	1	2	0
QUAL	0	76.4	2	2	0	0
QUAL	0	76.7	1	1	0	0
QUAL	0	76.9	1	1	0	0
QUAL	0	77.1	1	1	0	0
QUAL	0	77.2	5	1	4	0
QUAL	0	77.3	1	0	1	0
QUAL	0	77.4	5	3	2	0
QUAL	0	77.5	1	1	0	0
QUAL	0	77.8	1	1	0	0
QUAL	0	77.9	1	0	1	0
QUAL	0	78.0	0	0	0	1
QUAL	0	78.2	1	1	0	0
QUAL	0	78.3	1	1	0	0
QUAL	0	78.4	2	2	0	1
QUAL	0	78.5	2	1	1	0
QUAL	0	79.0	1	0	1	0
QUAL	0	79.1	4	1	3	0
QUAL	0	79.3	1	0	1	0
QUAL	0	79.4	1	0	1	0
QUAL	0	79.6	3	1	2	0
QUAL	0	79.9	0	0	0	1
QUAL	0	80.1	1	1	0	0
QUAL	0	80.3	1	0	1	0
QUAL	0	80.4	1	1	0	0
QUAL	0	80.5	2	2	0	0
QUAL	0	80.8	3	2	1	0
QUAL	0	81.0	1	1	0	0
QUAL	0	81.2	1	1	0	0
QUAL	0	81.3	1	1	0	0
QUAL	0	81.4	1	1	0	0
QUAL	0	82.0	2	1	1	0
QUAL	0	82.1	1	1	0	0
QUAL	0	82.2	1	0	1	0
QUAL	0	82.3	2	1	1	0
QUAL	0	82.4	1	1	0	0
QUAL	0	82.5	2	2	0	0
QUAL	0	82.6	2	1	1	0
QUAL	0	83.4	3	1	2	0
QUAL	0	83.5	1	1	0	0
QUAL	0	83.6	1	1	0	0
QUAL	0	84.1	1	0	1	0
QUAL	0	84.4	1	1	0	0
QUAL	0	84.5	1	1	0	0
QUAL	0	84.6	1	1	0	0
QUAL	0	84.7	1	0	1	0
QUAL	0	84.8	2	2	0	0
QUAL	0	84.9	2	2	0	0
QUAL	0	85.2	1	0	1	0
QUAL	0	85.3	2	2	0	0
QUAL	0	85.4	1	1	0	0
QUAL	0	86.1	1	1	0	0
QUAL	0	86.2	1	1	0	0
QUAL	0	86.4	1	1	0	0
QUAL	0	86.7	2	2	0	0
QUAL	0	86.8	1	0	1	0
QUAL	0	87.3	2	1	1	0
QUAL	0	87.4	1	1	0	1
QUAL	0	87.5	1	1	0	0
QUAL	0	87.7	1	0	1	0
QUAL	0	87.9	2	2	0	0
QUAL	0	88.1	1	1	0	0
QUAL	0	88.4	1	1	0	0
QUAL	0	88.8	3	2	1	0
QUAL	0	89.1	1	1	0	0
QUAL	0	89.3	1	1	0	0
QUAL	0	89.8	1	0	1	0
QUAL	0	89.9	1	1	0	0
QUAL	0	90.3	1	1	0	0
QUAL	0	90.6	1	1	0	0
QUAL	0	90.7	1	0	1	0
QUAL	0	90.8	3	3	0	0
QUAL	0	91.0	1	1	0	0
QUAL	0	91.1	1	1	0	0
QUAL	0	91.2	3	2	1	0
QUAL	0	91.3	1	1	0	0
QUAL	0	91.4	1	1	0	0
QUAL	0	91.6	1	1	0	0
QUAL	0	91.7	2	2	0	0
QUAL	0	92.2	2	1	1	1
QUAL	0	92.4	1	0	1	0
QUAL	0	93.2	1	1	0	0
QUAL	0	93.3	5	4	1	0
QUAL	0	93.5	2	1	1	0
QUAL	0	94.2	1	1	0	0
QUAL	0	94.3	0	0	0	1
QUAL	0	94.6	1	0	1	0
QUAL	0	94.8	1	1	0	0
QUAL	0	94.9	4	2	2	0
QUAL	0	95.0	1	0	1	0
QUAL	0	95.1	2	0	2	0
QUAL	0	95.3	2	1	1	1
QUAL	0	95.4	1	1	0	0
QUAL	0	95.8	1	0	1	0
QUAL	0	96.2	1	1	0	0
QUAL	0	96.3	1	0	1	0
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QUAL	0	218.4	18	11	7	1
QUAL	0	218.5	2	0	2	0
QUAL	0	218.6	10	8	2	0
QUAL	0	218.7	6	3	3	0
QUAL	0	218.8	3	2	1	0
QUAL	0	218.9	6	6	0	0
QUAL	0	219.0	3	2	1	0
QUAL	0	219.1	4	3	1	2
QUAL	0	219.2	10	7	3	0
QUAL	0	219.3	9	5	4	0
QUAL	0	219.4	27	16	11	0
QUAL	0	219.5	9	7	2	0
QUAL	0	219.6	7	4	3	0
QUAL	0	219.7	6	4	2	0
QUAL	0	219.8	9	4	5	0
QUAL	0	219.9	8	5	3	0
QUAL	0	220.0	2	2	0	0
QUAL	0	220.1	6	4	2	0
QUAL	0	220.2	3	2	1	1
QUAL	0	220.3	11	6	5	1
QUAL	0	220.4	39	24	15	1
QUAL	0	220.5	7	6	1	0
QUAL	0	220.6	9	5	4	0
QUAL	0	220.7	11	7	4	0
QUAL	0	220.8	4	4	0	0
QUAL	0	220.9	12	6	6	0
QUAL	0	221.0	5	3	2	0
QUAL	0	221.1	10	5	5	0
QUAL	0	221.2	11	4	7	0
QUAL	0	221.3	9	3	6	0
QUAL	0	221.4	27	16	11	0
QUAL	0	221.5	11	8	3	0
QUAL	0	221.6	14	7	7	0
QUAL	0	221.7	21	14	7	0
QUAL	0	221.8	20	9	11	0
QUAL	0	221.9	24	15	9	0
QUAL	0	222.0	31	15	16	0
QUAL	0	222.1	22	13	9	0
QUAL	0	222.2	53	28	25	0
QUAL	0	222.3	98	61	37	0
QUAL	0	222.4	57	38	19	0
QUAL	0	223.1	2	2	0	0
QUAL	0	223.2	1	1	0	0
QUAL	0	223.3	0	0	0	1
QUAL	0	223.4	15	13	2	1
QUAL	0	223.6	2	1	1	0
QUAL	0	224.0	1	1	0	0
QUAL	0	224.4	38	22	16	0
QUAL	0	224.7	1	1	0	0
QUAL	0	224.8	1	1	0	0
QUAL	0	225.1	0	0	0	1
QUAL	0	225.3	1	1	0	0
QUAL	0	225.4	38353	28571	9782	40
QUAL	0	225.6	1	1	0	0
QUAL	0	227.4	3	3	0	0
QUAL	0	227.8	3	3	0	0
QUAL	0	227.9	1	1	0	0
QUAL	0	228.0	3	2	1	1
QUAL	0	228.1	27	23	4	7
QUAL	0	228.2	177	133	44	10
QUAL	0	228.3	612	439	173	30
QUAL	0	228.4	590	295	295	6
# IDD, InDel distribution:
# IDD	[2]id	[3]length (deletions negative)	[4]number of sites	[5]number of genotypes	[6]mean VAF
IDD	0	-39	1	0	.
IDD	0	-35	1	0	.
IDD	0	-29	1	0	.
IDD	0	-22	1	0	.
IDD	0	-12	1	0	.
IDD	0	-9	1	0	.
IDD	0	-7	1	0	.
IDD	0	-6	2	0	.
IDD	0	-4	1	0	.
IDD	0	-3	11	0	.
IDD	0	-2	9	0	.
IDD	0	-1	91	0	.
IDD	0	1	88	0	.
IDD	0	2	16	0	.
IDD	0	3	14	0	.
IDD	0	4	2	0	.
IDD	0	6	2	0	.
IDD	0	7	1	0	.
IDD	0	8	1	0	.
# ST, Substitution types:
# ST	[2]id	[3]type	[4]count
ST	0	A>C	1355
ST	0	A>G	7731
ST	0	A>T	1931
ST	0	C>A	1487
ST	0	C>G	822
ST	0	C>T	7709
ST	0	G>A	7744
ST	0	G>C	782
ST	0	G>T	1428
ST	0	T>A	1951
ST	0	T>C	7971
ST	0	T>G	1534
# DP, depth:
#   - set id, see above
#   - the depth bin, corresponds to the depth (unless --depth was given)
#   - number of genotypes with this depth (zero unless -s/-S was given)
#   - fraction of genotypes with this depth (zero unless -s/-S was given)
#   - number of sites with this depth
#   - fraction of sites with this depth
# DP, Depth distribution
# DP	[2]id	[3]bin	[4]number of genotypes	[5]fraction of genotypes (%)	[6]number of sites	[7]fraction of sites (%)
DP	0	11	0	0.000000	973	2.282002
DP	0	12	0	0.000000	1060	2.486045
DP	0	13	0	0.000000	875	2.052160
DP	0	14	0	0.000000	910	2.134246
DP	0	15	0	0.000000	855	2.005254
DP	0	16	0	0.000000	845	1.981800
DP	0	17	0	0.000000	752	1.763685
DP	0	18	0	0.000000	815	1.911440
DP	0	19	0	0.000000	700	1.641728
DP	0	20	0	0.000000	727	1.705052
DP	0	21	0	0.000000	732	1.716778
DP	0	22	0	0.000000	681	1.597167
DP	0	23	0	0.000000	632	1.482246
DP	0	24	0	0.000000	594	1.393124
DP	0	25	0	0.000000	573	1.343872
DP	0	26	0	0.000000	566	1.327454
DP	0	27	0	0.000000	519	1.217224
DP	0	28	0	0.000000	495	1.160936
DP	0	29	0	0.000000	475	1.114030
DP	0	30	0	0.000000	475	1.114030
DP	0	31	0	0.000000	458	1.074159
DP	0	32	0	0.000000	414	0.970965
DP	0	33	0	0.000000	408	0.956893
DP	0	34	0	0.000000	382	0.895914
DP	0	35	0	0.000000	390	0.914677
DP	0	36	0	0.000000	338	0.792720
DP	0	37	0	0.000000	342	0.802101
DP	0	38	0	0.000000	360	0.844317
DP	0	39	0	0.000000	322	0.755195
DP	0	40	0	0.000000	341	0.799756
DP	0	41	0	0.000000	351	0.823209
DP	0	42	0	0.000000	313	0.734087
DP	0	43	0	0.000000	345	0.809137
DP	0	44	0	0.000000	269	0.630893
DP	0	45	0	0.000000	306	0.717670
DP	0	46	0	0.000000	319	0.748159
DP	0	47	0	0.000000	250	0.586331
DP	0	48	0	0.000000	254	0.595713
DP	0	49	0	0.000000	266	0.623857
DP	0	50	0	0.000000	238	0.558188
DP	0	51	0	0.000000	268	0.628547
DP	0	52	0	0.000000	250	0.586331
DP	0	53	0	0.000000	277	0.649655
DP	0	54	0	0.000000	239	0.560533
DP	0	55	0	0.000000	248	0.581641
DP	0	56	0	0.000000	234	0.548806
DP	0	57	0	0.000000	211	0.494864
DP	0	58	0	0.000000	196	0.459684
DP	0	59	0	0.000000	220	0.515972
DP	0	60	0	0.000000	199	0.466720
DP	0	61	0	0.000000	224	0.525353
DP	0	62	0	0.000000	193	0.452648
DP	0	63	0	0.000000	205	0.480792
DP	0	64	0	0.000000	172	0.403396
DP	0	65	0	0.000000	192	0.450303
DP	0	66	0	0.000000	157	0.368216
DP	0	67	0	0.000000	175	0.410432
DP	0	68	0	0.000000	156	0.365871
DP	0	69	0	0.000000	166	0.389324
DP	0	70	0	0.000000	159	0.372907
DP	0	71	0	0.000000	159	0.372907
DP	0	72	0	0.000000	166	0.389324
DP	0	73	0	0.000000	157	0.368216
DP	0	74	0	0.000000	154	0.361180
DP	0	75	0	0.000000	168	0.394015
DP	0	76	0	0.000000	139	0.326000
DP	0	77	0	0.000000	165	0.386979
DP	0	78	0	0.000000	159	0.372907
DP	0	79	0	0.000000	128	0.300202
DP	0	80	0	0.000000	147	0.344763
DP	0	81	0	0.000000	139	0.326000
DP	0	82	0	0.000000	109	0.255641
DP	0	83	0	0.000000	141	0.330691
DP	0	84	0	0.000000	124	0.290820
DP	0	85	0	0.000000	128	0.300202
DP	0	86	0	0.000000	134	0.314274
DP	0	87	0	0.000000	136	0.318964
DP	0	88	0	0.000000	129	0.302547
DP	0	89	0	0.000000	121	0.283784
DP	0	90	0	0.000000	116	0.272058
DP	0	91	0	0.000000	114	0.267367
DP	0	92	0	0.000000	142	0.333036
DP	0	93	0	0.000000	139	0.326000
DP	0	94	0	0.000000	118	0.276748
DP	0	95	0	0.000000	118	0.276748
DP	0	96	0	0.000000	121	0.283784
DP	0	97	0	0.000000	111	0.260331
DP	0	98	0	0.000000	130	0.304892
DP	0	99	0	0.000000	93	0.218115
DP	0	100	0	0.000000	104	0.243914
DP	0	101	0	0.000000	109	0.255641
DP	0	102	0	0.000000	129	0.302547
DP	0	103	0	0.000000	107	0.250950
DP	0	104	0	0.000000	99	0.232187
DP	0	105	0	0.000000	106	0.248605
DP	0	106	0	0.000000	126	0.295511
DP	0	107	0	0.000000	106	0.248605
DP	0	108	0	0.000000	88	0.206389
DP	0	109	0	0.000000	71	0.166518
DP	0	110	0	0.000000	88	0.206389
DP	0	111	0	0.000000	87	0.204043
DP	0	112	0	0.000000	81	0.189971
DP	0	113	0	0.000000	92	0.215770
DP	0	114	0	0.000000	77	0.180590
DP	0	115	0	0.000000	92	0.215770
DP	0	116	0	0.000000	90	0.211079
DP	0	117	0	0.000000	73	0.171209
DP	0	118	0	0.000000	85	0.199353
DP	0	119	0	0.000000	82	0.192317
DP	0	120	0	0.000000	70	0.164173
DP	0	121	0	0.000000	83	0.194662
DP	0	122	0	0.000000	62	0.145410
DP	0	123	0	0.000000	77	0.180590
DP	0	124	0	0.000000	73	0.171209
DP	0	125	0	0.000000	73	0.171209
DP	0	126	0	0.000000	91	0.213425
DP	0	127	0	0.000000	69	0.161827
DP	0	128	0	0.000000	70	0.164173
DP	0	129	0	0.000000	78	0.182935
DP	0	130	0	0.000000	91	0.213425
DP	0	131	0	0.000000	70	0.164173
DP	0	132	0	0.000000	65	0.152446
DP	0	133	0	0.000000	76	0.178245
DP	0	134	0	0.000000	70	0.164173
DP	0	135	0	0.000000	70	0.164173
DP	0	136	0	0.000000	85	0.199353
DP	0	137	0	0.000000	70	0.164173
DP	0	138	0	0.000000	68	0.159482
DP	0	139	0	0.000000	57	0.133684
DP	0	140	0	0.000000	67	0.157137
DP	0	141	0	0.000000	66	0.154792
DP	0	142	0	0.000000	65	0.152446
DP	0	143	0	0.000000	62	0.145410
DP	0	144	0	0.000000	55	0.128993
DP	0	145	0	0.000000	57	0.133684
DP	0	146	0	0.000000	56	0.131338
DP	0	147	0	0.000000	60	0.140720
DP	0	148	0	0.000000	50	0.117266
DP	0	149	0	0.000000	53	0.124302
DP	0	150	0	0.000000	65	0.152446
DP	0	151	0	0.000000	62	0.145410
DP	0	152	0	0.000000	47	0.110230
DP	0	153	0	0.000000	64	0.150101
DP	0	154	0	0.000000	48	0.112576
DP	0	155	0	0.000000	52	0.121957
DP	0	156	0	0.000000	66	0.154792
DP	0	157	0	0.000000	64	0.150101
DP	0	158	0	0.000000	70	0.164173
DP	0	159	0	0.000000	37	0.086777
DP	0	160	0	0.000000	56	0.131338
DP	0	161	0	0.000000	65	0.152446
DP	0	162	0	0.000000	52	0.121957
DP	0	163	0	0.000000	58	0.136029
DP	0	164	0	0.000000	55	0.128993
DP	0	165	0	0.000000	60	0.140720
DP	0	166	0	0.000000	54	0.126648
DP	0	167	0	0.000000	53	0.124302
DP	0	168	0	0.000000	58	0.136029
DP	0	169	0	0.000000	54	0.126648
DP	0	170	0	0.000000	68	0.159482
DP	0	171	0	0.000000	66	0.154792
DP	0	172	0	0.000000	47	0.110230
DP	0	173	0	0.000000	52	0.121957
DP	0	174	0	0.000000	59	0.138374
DP	0	175	0	0.000000	49	0.114921
DP	0	176	0	0.000000	41	0.096158
DP	0	177	0	0.000000	58	0.136029
DP	0	178	0	0.000000	67	0.157137
DP	0	179	0	0.000000	45	0.105540
DP	0	180	0	0.000000	54	0.126648
DP	0	181	0	0.000000	48	0.112576
DP	0	182	0	0.000000	62	0.145410
DP	0	183	0	0.000000	46	0.107885
DP	0	184	0	0.000000	51	0.119612
DP	0	185	0	0.000000	55	0.128993
DP	0	186	0	0.000000	44	0.103194
DP	0	187	0	0.000000	44	0.103194
DP	0	188	0	0.000000	49	0.114921
DP	0	189	0	0.000000	45	0.105540
DP	0	190	0	0.000000	56	0.131338
DP	0	191	0	0.000000	61	0.143065
DP	0	192	0	0.000000	45	0.105540
DP	0	193	0	0.000000	53	0.124302
DP	0	194	0	0.000000	42	0.098504
DP	0	195	0	0.000000	43	0.100849
DP	0	196	0	0.000000	35	0.082086
DP	0	197	0	0.000000	36	0.084432
DP	0	198	0	0.000000	54	0.126648
DP	0	199	0	0.000000	57	0.133684
DP	0	200	0	0.000000	57	0.133684
DP	0	201	0	0.000000	55	0.128993
DP	0	202	0	0.000000	53	0.124302
DP	0	203	0	0.000000	52	0.121957
DP	0	204	0	0.000000	39	0.091468
DP	0	205	0	0.000000	48	0.112576
DP	0	206	0	0.000000	37	0.086777
DP	0	207	0	0.000000	52	0.121957
DP	0	208	0	0.000000	55	0.128993
DP	0	209	0	0.000000	56	0.131338
DP	0	210	0	0.000000	45	0.105540
DP	0	211	0	0.000000	46	0.107885
DP	0	212	0	0.000000	54	0.126648
DP	0	213	0	0.000000	52	0.121957
DP	0	214	0	0.000000	46	0.107885
DP	0	215	0	0.000000	69	0.161827
DP	0	216	0	0.000000	52	0.121957
DP	0	217	0	0.000000	37	0.086777
DP	0	218	0	0.000000	60	0.140720
DP	0	219	0	0.000000	51	0.119612
DP	0	220	0	0.000000	53	0.124302
DP	0	221	0	0.000000	63	0.147756
DP	0	222	0	0.000000	66	0.154792
DP	0	223	0	0.000000	55	0.128993
DP	0	224	0	0.000000	59	0.138374
DP	0	225	0	0.000000	73	0.171209
DP	0	226	0	0.000000	61	0.143065
DP	0	227	0	0.000000	67	0.157137
DP	0	228	0	0.000000	58	0.136029
DP	0	229	0	0.000000	71	0.166518
DP	0	230	0	0.000000	82	0.192317
DP	0	231	0	0.000000	72	0.168863
DP	0	232	0	0.000000	65	0.152446
DP	0	233	0	0.000000	67	0.157137
DP	0	234	0	0.000000	81	0.189971
DP	0	235	0	0.000000	86	0.201698
DP	0	236	0	0.000000	84	0.197007
DP	0	237	0	0.000000	88	0.206389
DP	0	238	0	0.000000	118	0.276748
DP	0	239	0	0.000000	115	0.269712
DP	0	240	0	0.000000	110	0.257986
DP	0	241	0	0.000000	129	0.302547
DP	0	242	0	0.000000	135	0.316619
DP	0	243	0	0.000000	149	0.349454
DP	0	244	0	0.000000	162	0.379943
DP	0	245	0	0.000000	194	0.454993
DP	0	246	0	0.000000	234	0.548806
DP	0	247	0	0.000000	273	0.640274
DP	0	248	0	0.000000	356	0.834936
DP	0	249	0	0.000000	509	1.193771
DP	0	250	0	0.000000	536	1.257095
DP	0	251	0	0.000000	336	0.788029
DP	0	252	0	0.000000	246	0.576950
DP	0	253	0	0.000000	182	0.426849
DP	0	254	0	0.000000	131	0.307238
DP	0	255	0	0.000000	107	0.250950
DP	0	256	0	0.000000	100	0.234533
DP	0	257	0	0.000000	58	0.136029
DP	0	258	0	0.000000	53	0.124302
DP	0	259	0	0.000000	57	0.133684
DP	0	260	0	0.000000	46	0.107885
DP	0	261	0	0.000000	37	0.086777
DP	0	262	0	0.000000	29	0.068014
DP	0	263	0	0.000000	30	0.070360
DP	0	264	0	0.000000	23	0.053942
DP	0	265	0	0.000000	26	0.060978
DP	0	266	0	0.000000	21	0.049252
DP	0	267	0	0.000000	13	0.030489
DP	0	268	0	0.000000	17	0.039871
DP	0	269	0	0.000000	13	0.030489
DP	0	270	0	0.000000	21	0.049252
DP	0	271	0	0.000000	11	0.025799
DP	0	272	0	0.000000	6	0.014072
DP	0	273	0	0.000000	10	0.023453
DP	0	274	0	0.000000	9	0.021108
DP	0	275	0	0.000000	9	0.021108
DP	0	276	0	0.000000	8	0.018763
DP	0	277	0	0.000000	6	0.014072
DP	0	278	0	0.000000	8	0.018763
DP	0	279	0	0.000000	8	0.018763
DP	0	280	0	0.000000	6	0.014072
DP	0	281	0	0.000000	6	0.014072
DP	0	282	0	0.000000	7	0.016417
DP	0	283	0	0.000000	5	0.011727
DP	0	284	0	0.000000	6	0.014072
DP	0	285	0	0.000000	6	0.014072
DP	0	286	0	0.000000	8	0.018763
DP	0	287	0	0.000000	5	0.011727
DP	0	288	0	0.000000	7	0.016417
DP	0	289	0	0.000000	4	0.009381
DP	0	290	0	0.000000	5	0.011727
DP	0	291	0	0.000000	5	0.011727
DP	0	292	0	0.000000	3	0.007036
DP	0	293	0	0.000000	5	0.011727
DP	0	294	0	0.000000	3	0.007036
DP	0	295	0	0.000000	1	0.002345
DP	0	296	0	0.000000	1	0.002345
DP	0	297	0	0.000000	2	0.004691
DP	0	298	0	0.000000	3	0.007036
DP	0	299	0	0.000000	2	0.004691
DP	0	300	0	0.000000	1	0.002345
DP	0	301	0	0.000000	2	0.004691
DP	0	302	0	0.000000	2	0.004691
DP	0	303	0	0.000000	1	0.002345
DP	0	304	0	0.000000	2	0.004691
DP	0	305	0	0.000000	1	0.002345
DP	0	307	0	0.000000	5	0.011727
DP	0	308	0	0.000000	2	0.004691
DP	0	309	0	0.000000	1	0.002345
DP	0	311	0	0.000000	3	0.007036
DP	0	312	0	0.000000	1	0.002345
DP	0	314	0	0.000000	2	0.004691
DP	0	316	0	0.000000	2	0.004691
DP	0	320	0	0.000000	1	0.002345
DP	0	321	0	0.000000	1	0.002345
DP	0	323	0	0.000000	3	0.007036
DP	0	324	0	0.000000	1	0.002345
DP	0	326	0	0.000000	1	0.002345
DP	0	327	0	0.000000	2	0.004691
DP	0	328	0	0.000000	2	0.004691
DP	0	329	0	0.000000	1	0.002345
DP	0	330	0	0.000000	1	0.002345
DP	0	333	0	0.000000	1	0.002345
DP	0	334	0	0.000000	1	0.002345
DP	0	337	0	0.000000	3	0.007036
DP	0	338	0	0.000000	1	0.002345
DP	0	341	0	0.000000	1	0.002345
DP	0	343	0	0.000000	1	0.002345
DP	0	346	0	0.000000	2	0.004691
DP	0	347	0	0.000000	1	0.002345
DP	0	350	0	0.000000	1	0.002345
DP	0	357	0	0.000000	1	0.002345